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Ciliopathies

Rare and Inherited Diseases · NLM MeSH · updated 2026-10-29 · version 1

Citations verified against PubMedNot yet clinician-reviewed10 referencesApproximately 4 min read

Genetic disorders caused by defects in genes related to the primary cilium; basal body; or centrosome.

Table of Contents

1. Definition2. Research landscape3. Reading the evidence4. Open-access studies5. Key reviews6. References7. About this article

Definition and research guide

This page combines a MeSH definition, publication statistics and selected research abstracts. It is a starting point for reading the literature, not a medical textbook or a systematic evidence review.

Content available: 4 complete abstracts (844 words), 10 references. Full article text is not stored or reproduced here; follow the PMID, DOI or PMC links to read the original sources and their access terms.

Definition

Genetic disorders caused by defects in genes related to the primary cilium; basal body; or centrosome. Primary features may include obesity, skeletal dysplasia; polydactyly and malformations that primarily involve the liver, eye or kidneys.

Definition: NLM Medical Subject Headings (MeSH) scope note (Public domain (U.S. National Library of Medicine); attribution requested). View the MeSH record.

Also known as: Ciliopathy.

Where it fits in the MeSH classification

Broader topics
Abnormalities, Multiple; Genetic Diseases, Inborn
Narrower topics
Alstrom Syndrome; Bardet-Biedl Syndrome; Caroli Disease; Ciliary Motility Disorders; von Hippel-Lindau Disease; Polycystic Kidney Diseases
See also
Ciliary Motility Disorders

Related concepts

  • Cilium
  • Basal Body
  • Centrosome
  • Skeletal Dysplasia
  • Polydactyly

Research landscape

PubMed indexes 19,340 records tagged with the MeSH heading “Ciliopathies” (counts retrieved 2026-10-29). 3,703 of them (19.1%) were published from 2020 onward, and the busiest period so far is through 1999 with 6,917 records.

Reviews account for 3,025 records (15.6%) and meta-analyses for 74. Randomized controlled trials number 149 (0.8%) as a share of all records on the topic. Randomized trials make up only a small share of this literature, so much of what is known comes from laboratory, observational or descriptive work.

PubMed records by publication periodthrough 1999: 6,917 records; 2000-2009: 3,797 records; 2010-2019: 4,923 records; 2020 onward: 3,703 records6,917through 19993,7972000-20094,9232010-20193,7032020 onward
Records in PubMed indexed with this heading, by publication period. Real counts from NCBI E-utilities; the final period covers only part of the current year. Volume reflects how much has been published, not how strong the evidence is.
Show the data
PeriodRecords
through 19996,917
2000-20093,797
2010-20194,923
2020 onward3,703
Share of records by publication typeReviews: 15.6 percent; Meta-analyses: 0.4 percent; Randomized controlled trials: 0.8 percentReviews15.6% (3,025)Meta-analyses0.4% (74)Randomized controlled trials0.8% (149)
Share of all PubMed records on this heading that carry each publication type. Types overlap with other records, so the shares do not sum to 100%.
Publication-type chart data
Publication types among 19,340 PubMed records
TypeRecordsShare
Reviews3,02515.6%
Meta-analyses740.4%
Randomized controlled trials1490.8%

Method: PubMed query "Ciliopathies"[MeSH Terms] with publication-type and date filters, retrieved 2026-10-29.

Reading the evidence in rare and inherited diseases

Rare conditions are difficult to study: few patients means small studies, case reports and registries are common, and randomized trials are the exception. Small samples limit precision and can exaggerate effects, and cases reported in the literature may be the most severe or unusual. Evidence from many small studies is best read together. Check how patients were identified, how many were included and how long they were followed.

Evidence from open-access studies

These open-access studies come from PubMed’s best-match results for this heading (papers whose main topic it is), ranked here by citation count, with one recent addition. Each abstract is reproduced in full under its recorded open licence so that you can read the authors’ own words. They illustrate the literature; they are not a systematic summary of it. Citation counts measure attention, not reliability or clinical benefit.

Study comparison — selected abstracts, not a systematic review
Study / authorsYearSource label / designEurope PMC citationsLicence / source
Mechanistic Insights into the Pathogenesis of Polycystic Kidney Disease
Al-Orjani Q, Alshriem LA, Gallagher G, Buqaileh R, Azizi N, AbouAlaiwi W
2025Review article
Design not recorded in structured metadata
20cc by
PMID 40801635 · DOI · PMC12345701
Autosomal dominant polycystic kidney disease: an overview of recent genetic and clinical advances
Borghol AH, Bou Antoun MT, Hanna C, Salih M, Rahbari-Oskoui FF, Chebib FT
2025Review article
Design not recorded in structured metadata
15cc by
PMID 40268755 · DOI · PMC12020221
In vivo base editing reduces liver cysts in autosomal dominant polycystic kidney disease
Ibel A, Bhardwaj R, Yilmaz DE, Kong S, Wendlinger S, Cordero C, et al.
2025Research article
Design not recorded in structured metadata
7cc by
PMID 40842155 · DOI · PMC12628146
Inactivation of Pkd2 in adult mice results in delayed cyst formation and identifies sex as a major modifier of disease severity
Outeda P, Summers P, Basquin D, Xu R, Hunt J, Menezes LF, et al.
2026Research article
Design not recorded in structured metadata
6cc by
PMID 41077129 · DOI · PMC13449052

Mechanistic Insights into the Pathogenesis of Polycystic Kidney Disease [1]

Review article Al-Orjani Q, Alshriem LA, Gallagher G, Buqaileh R, Azizi N, AbouAlaiwi W · · 2025 · cited 20 times (Europe PMC)

Abstract reading summary — source excerpts
Opening excerpt
Autosomal Dominant Polycystic Kidney Disease (ADPKD) is a systemic ciliopathy resulting from loss-of-function mutations in the PKD1 and PKD2 genes, which encode polycystin-1 (PC1) and polycystin-2 (PC2), respectively.
Closing excerpt
This review gathers recent molecular insights and highlights both established and emerging targets to guide targeted treatment strategies in ADPKD.
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (183 words)

Autosomal Dominant Polycystic Kidney Disease (ADPKD) is a systemic ciliopathy resulting from loss-of-function mutations in the PKD1 and PKD2 genes, which encode polycystin-1 (PC1) and polycystin-2 (PC2), respectively. PC1 and PC2 regulate mechanosensation, calcium signaling, and key pathways controlling tubular epithelial structure and function. Loss of PC1/PC2 disrupts calcium homeostasis, elevates cAMP, and activates proliferative cascades such as PKA-B-Raf-MEK-ERK, mTOR, and Wnt, driving cystogenesis via epithelial proliferation, impaired apoptosis, fluid secretion, and fibrosis. Recent evidence also implicates novel signaling axes in ADPKD progression including, the Hippo pathway, where dysregulated YAP/TAZ activity enhances c-Myc-mediated proliferation; the stimulator of interferon genes (STING) pathway, which is activated by mitochondrial DNA release and linked to NF-κB-driven inflammation and fibrosis; and the TWEAK/Fn14 pathway, which mediates pro-inflammatory and pro-apoptotic responses via ERK and NF-κB activation in tubular cells. Mitochondrial dysfunction, oxidative stress, and maladaptive extracellular matrix remodeling further exacerbate disease progression. A refined understanding of ADPKD's complex signaling networks provides a foundation for precision medicine and next-generation therapeutics. This review gathers recent molecular insights and highlights both established and emerging targets to guide targeted treatment strategies in ADPKD.

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 40801635 · DOI · PMC12345701

Autosomal dominant polycystic kidney disease: an overview of recent genetic and clinical advances [2]

Review article Borghol AH, Bou Antoun MT, Hanna C, Salih M, Rahbari-Oskoui FF, Chebib FT · · 2025 · cited 15 times (Europe PMC)

Abstract reading summary — source excerpts
Opening excerpt
Autosomal Dominant Polycystic Kidney Disease (ADPKD) is the most common inherited kidney disease, characterized by the progressive development of multiple kidney cysts, leading to a gradual decline in kidney function.
Closing excerpt
Despite substantial progress in understanding ADPKD, there is a large need for additional effective treatments and prognostic markers to provide a more personalized care for these patients.
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (210 words)

Autosomal Dominant Polycystic Kidney Disease (ADPKD) is the most common inherited kidney disease, characterized by the progressive development of multiple kidney cysts, leading to a gradual decline in kidney function. ADPKD is also the fourth leading cause of kidney failure (KF) in adults. In addition to kidney manifestations, ADPKD is associated with various extrarenal features, including liver cysts, cardiovascular abnormalities, intracranial aneurysms, and chronic pain with significant impact on patients' quality of life. While several disease-modifying agents have been tested in ADPKD, tolvaptan remains the only approved drug by the US Food and Drug Administration. The Mayo Imaging Classification is currently the most practical tool for predicting rate of kidney disease progression in ADPKD. This review provides a comprehensive overview of ADPKD, focusing on its genetics, pathophysiology, clinical presentation, management, and prognostic tools. Advances in diagnostic imaging and genetic testing have improved the early detection of ADPKD, allowing better classification of patients and prediction of KF. The review also discusses current therapeutic approaches to ADPKD, including tolvaptan, a vasopressin V2-receptor antagonist. Additionally, we address specific issues in children and pregnant individuals with ADPKD. Despite substantial progress in understanding ADPKD, there is a large need for additional effective treatments and prognostic markers to provide a more personalized care for these patients.

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 40268755 · DOI · PMC12020221

In vivo base editing reduces liver cysts in autosomal dominant polycystic kidney disease [3]

Research article Ibel A, Bhardwaj R, Yilmaz DE, Kong S, Wendlinger S, Cordero C, et al. · · 2025 · cited 7 times (Europe PMC)

Abstract reading summary — source excerpts
Opening excerpt
Autosomal dominant polycystic kidney disease (ADPKD) is the most prevalent genetic kidney disorder, affecting over 10 million individuals worldwide.
Closing excerpt
These findings provide the first evidence that genome editing may ameliorate key features of ADPKD, opening promising therapeutic perspectives for affected patients and their families.
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (200 words)

Autosomal dominant polycystic kidney disease (ADPKD) is the most prevalent genetic kidney disorder, affecting over 10 million individuals worldwide. Cystic expansion typically progresses to kidney failure and also involves the liver with limited treatment options. Pathogenic variants in PKD1 or PKD2 account for 85%-90% of cases. Genetic re-expression of Pkd1 or Pkd2 has been shown to partially reverse key characteristics of the disease phenotype in mice. Despite advancements in understanding the genetic basis, it remains unclear whether correcting pathogenic variants can effectively prevent, modify, or reverse the disease. Additionally, the feasibility of genome editing as a treatment remains largely unexplored. In this study, we employed CRISPR base editing to correct representative pathogenic PKD1 variants selected from a patient cohort, achieving precise and efficient editing in vitro. Correction of a murine missense variant (c.6646C>T (R2216W)) in primary renal epithelial cells increased polycystin-1 expression and reduced the endoplasmic reticulum stress marker sXBP1. In vivo, base editor delivery to the c.6646C>T (R2216W) knockin mouse enabled correction of the pathogenic variant, resulting in a significant reduction in liver cysts. These findings provide the first evidence that genome editing may ameliorate key features of ADPKD, opening promising therapeutic perspectives for affected patients and their families.

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 40842155 · DOI · PMC12628146

Inactivation of Pkd2 in adult mice results in delayed cyst formation and identifies sex as a major modifier of disease severity [4]

Research article Outeda P, Summers P, Basquin D, Xu R, Hunt J, Menezes LF, et al. · · 2026 · cited 6 times (Europe PMC)

Abstract reading summary — source excerpts
Opening excerpt
IntroductionAutosomal Dominant Polycystic Kidney Disease (ADPKD) is caused by mutations in PKD1 or PKD2 and is the most common single-gene disorder resulting in kidney failure.
Closing excerpt
Our data highlight the importance of sex as a biological variable that should be considered in any study design using orthologous mouse models with late Pkd2 inactivation.
Interpretation limits
Verbatim excerpts from the authors’ abstract; the closing excerpt may describe a finding, limitation or recommendation. Design, population, effect size and uncertainty have not been independently extracted or appraised. Read the complete abstract and linked paper before interpreting the findings.
Read complete abstract (251 words)

IntroductionAutosomal Dominant Polycystic Kidney Disease (ADPKD) is caused by mutations in PKD1 or PKD2 and is the most common single-gene disorder resulting in kidney failure. Since deletion of either Pkd1 or Pkd2 in mice is embryonically lethal, conditional alleles have become indispensable tools for studying the pathobiology of ADPKD and for preclinical testing. The rapidity of cyst formation in Pkd1 conditional mice depends on the timing of gene inactivation, but this has never been systematically studied for Pkd2. Here, we characterize the kinetics of cystogenesis in a Pkd2 conditional mouse model and identify associated alterations in gene expression.MethodsUsing a conditional mouse model, we inactivated Pkd2 at different postnatal stages and characterized the severity of cyst formation. Additionally, we performed RNA-sequencing analysis to identify gene expression changes associated with Pkd2 loss in males and females.ResultsThere is a similar developmental switch in Pkd2 conditional mice with delayed cyst formation after Pkd2 inactivation at or beyond postnatal day 14. Like Pkd1 models, cystogenesis is associated with differential expression of genes involved in metabolism, cell proliferation, and immune response. We confirm that sex is a key modifier of ADPKD progression with differences in disease severity occurring in the context of significant transcriptional differences between males and females that are independent of the Pkd2 genotype.ConclusionsPkd2 conditional mice are a useful model for understanding ADPKD pathogenesis and for testing therapeutics. Our data highlight the importance of sex as a biological variable that should be considered in any study design using orthologous mouse models with late Pkd2 inactivation.

Abstract reproduced from the open-access article under the recorded cc by licence; © the authors. PMID 41077129 · DOI · PMC13449052

Key reviews and meta-analyses

The most cited review-type papers among PubMed’s best-match results for this heading, listed with bibliographic details only. Follow the links for the full text and access terms.

  • Research article Primary cilia as dynamic and diverse signalling hubs in development and disease [5]
    Mill P, Christensen ST, Pedersen LB · Nat Rev Genet · 2023 · cited 408 times (Europe PMC)
  • Research article Diagnosis of Primary Ciliary Dyskinesia. An Official American Thoracic Society Clinical Practice Guideline [6]
    Shapiro AJ, Davis SD, Polineni D, Manion M, Rosenfeld M, Dell SD, et al. · Am J Respir Crit Care Med · 2018 · cited 380 times (Europe PMC)
  • Research article Clinical manifestations in primary ciliary dyskinesia: systematic review and meta-analysis [7]
    Goutaki M, Meier AB, Halbeisen FS, Lucas JS, Dell SD, Maurer E, et al. · Eur Respir J · 2016 · cited 192 times (Europe PMC)
  • Research article Von Hippel-Lindau disease: insights into oxygen sensing, protein degradation, and cancer [8]
    Kaelin WG · J Clin Invest · 2022 · cited 140 times (Europe PMC)
  • Research article Adipose Tissue Hyperplasia and Hypertrophy in Common and Syndromic Obesity-The Case of BBS Obesity [9]
    Horwitz A, Birk R · Nutrients · 2023 · cited 104 times (Europe PMC)
  • Research article KDIGO 2025 clinical practice guideline for the evaluation, management, and treatment of autosomal dominant polycystic kidney disease (ADPKD): executive summary [10]
    Torres VE, Ahn C, Barten TRM, Brosnahan G, Cadnapaphornchai MA, Chapman AB, et al. · Kidney Int · 2025 · cited 103 times (Europe PMC)

References

  1. Al-Orjani Q, Alshriem LA, Gallagher G, Buqaileh R, Azizi N, AbouAlaiwi W. Mechanistic Insights into the Pathogenesis of Polycystic Kidney Disease. . 2025. PMID 40801635 · DOI · PMC12345701
  2. Borghol AH, Bou Antoun MT, Hanna C, Salih M, Rahbari-Oskoui FF, Chebib FT. Autosomal dominant polycystic kidney disease: an overview of recent genetic and clinical advances. . 2025. PMID 40268755 · DOI · PMC12020221
  3. Ibel A, Bhardwaj R, Yilmaz DE, Kong S, Wendlinger S, Cordero C, et al.. In vivo base editing reduces liver cysts in autosomal dominant polycystic kidney disease. . 2025. PMID 40842155 · DOI · PMC12628146
  4. Outeda P, Summers P, Basquin D, Xu R, Hunt J, Menezes LF, et al.. Inactivation of Pkd2 in adult mice results in delayed cyst formation and identifies sex as a major modifier of disease severity. . 2026. PMID 41077129 · DOI · PMC13449052
  5. Mill P, Christensen ST, Pedersen LB. Primary cilia as dynamic and diverse signalling hubs in development and disease. Nat Rev Genet. 2023. PMID 37072495 · DOI · PMC7615029
  6. Shapiro AJ, Davis SD, Polineni D, Manion M, Rosenfeld M, Dell SD, et al.. Diagnosis of Primary Ciliary Dyskinesia. An Official American Thoracic Society Clinical Practice Guideline. Am J Respir Crit Care Med. 2018. PMID 29905515 · DOI · PMC6006411
  7. Goutaki M, Meier AB, Halbeisen FS, Lucas JS, Dell SD, Maurer E, et al.. Clinical manifestations in primary ciliary dyskinesia: systematic review and meta-analysis. Eur Respir J. 2016. PMID 27492829 · DOI
  8. Kaelin WG. Von Hippel-Lindau disease: insights into oxygen sensing, protein degradation, and cancer. J Clin Invest. 2022. PMID 36106637 · DOI · PMC9479583
  9. Horwitz A, Birk R. Adipose Tissue Hyperplasia and Hypertrophy in Common and Syndromic Obesity-The Case of BBS Obesity. Nutrients. 2023. PMID 37571382 · DOI · PMC10421039
  10. Torres VE, Ahn C, Barten TRM, Brosnahan G, Cadnapaphornchai MA, Chapman AB, et al.. KDIGO 2025 clinical practice guideline for the evaluation, management, and treatment of autosomal dominant polycystic kidney disease (ADPKD): executive summary. Kidney Int. 2025. PMID 39848746 · DOI

About this article

Sources
NLM Medical Subject Headings (definition, synonyms); NCBI PubMed (counts, identifiers); Europe PMC (open-access abstracts and citation counts).
Verification
Every reference was resolved against PubMed on 2026-10-31; title, year and DOI matched.
Review state
automated source verified; no human expert review has been recorded yet.
Version
1, last updated 2026-10-29.

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At a glance

19,340
PubMed records on this heading
19%
published since 2020
3,025
review articles
149
randomized trials
10
verified references below

Counts come from PubMed on 2026-10-29; they show how much has been written, not how strong the evidence is.

Related topics See all →

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