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Desmoplastic Melanoma (Broad Institute, Nat Genet 2015)

cBioPortal DataHub · study desm_broad_2015 · www.cbioportal.org/study/summary?id=desm_broad_2015

Study metadataOpen database (ODbL)PubMed 1Other published and consortium studiesApproximately 1 min read

Table of Contents

1. Summary2. Study description3. Citation & PubMed4. Source & licence

Summary

Desmoplastic Melanoma (Broad Institute, Nat Genet 2015) is a study catalogued by cBioPortal DataHub under the cancer-type code desm. EvidenceHelix groups it with skin and eye studies.

This page is catalog metadata only: what the study is called and where to find it. It does not report findings, mutation frequencies or patient numbers, and it is not clinical guidance.

What this page is

Study description

Exome/Whole Genome sequencing of 20 desmoplastic melanoma tumor/normal pairs.

Text as published in the source's study metadata.

Citation & PubMed

Shain et al. Nat Genet 2015

Linked PubMed records: PMID 26343386

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier
desm_broad_2015
Short name
DESM (Broad 2015)
Source cancer-type code
desm
Reference genome
not given
Source access groups
PUBLIC
Original study
View on cBioPortal
Metadata file
meta_study.txt at e1b75cd25b
Database licence
ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data.

Citations

Shain et al. Nat Genet 2015

  • PubMed record 26343386 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

  • Acral Melanoma (TGEN, Genome Res 2017)

    Whole exome sequencing and transcriptome analysis of 34 Acral Melanoma patients (33 with matched normals).

    Skin and eyeOther published and consortium studiesSource code melPubMed 1
  • Basal Cell Carcinoma (UNIGE, Nat Genet 2016)

    Whole-exome sequencing of 126 basal cell carcinoma tumor/normal pairs; targeted sequencing of 163 sporadic samples (40 tumor/normal pairs) and 4 Gorlin symdrome basal cell carcinomas.

    Skin and eyeOther published and consortium studiesSource code bccPubMed 1
  • Cutaneous Squamous Cell Carcinoma (DFCI, Clin Cancer Res 2015)

    Targeted sequencing of 29 metastatic cutaneous squamous cell carcinoma samples.

    Skin and eyeOther published and consortium studiesSource code csccPubMed 1
  • Cutaneous Squamous Cell Carcinoma (MD Anderson, Clin Cancer Res 2014)

    Whole-exome sequencing of tumor/normal pairs from 39 aggressive cutaneous squamous cell carcinoma cases.

    Skin and eyeOther published and consortium studiesSource code csccPubMed 1
  • Cutaneous Squamous Cell Carcinoma (UCSF, NPJ Genom Med 2021)

    Catalogue of driver genes in cutaneous squamous cell carcinoma. Meta-analysis of 105 normal/tumor pairs.

    Skin and eyeOther published and consortium studiesSource code csccPubMed 1
  • Cutaneous Squamous Cell Carcinoma (UOW, Front Oncol 2022)

    Whole genome sequencing of 25 metastatic cutaneous squamous cell carcinoma and their matched normals. Generated by the Ranson Lab 2022.

    Skin and eyeOther published and consortium studiesSource code csccPubMed 1
  • Melanoma (Broad/Dana Farber, Nature 2012)

    Whole Genome Sequencing of 25 metastatic melanoma samples with matched normals

    Skin and eyeOther published and consortium studiesSource code skcmPubMed 1
  • Metastatic Melanoma (DFCI, Nat Med. 2019) - iAtlas Harmonized

    Whole-exome sequencing and neoantigen landscape analysis of 122 patients with metastatic melanoma treated with anti-PD1 ICB, along with their matched normal samples. The reprocessing of raw sequencing data is coordina…

    Skin and eyeOther published and consortium studiesSource code melPubMed 1

Your notes

Notes and highlights stay in this browser only; they are not sent to EvidenceHelix.

At a glance

Study ID
desm_broad_2015
Cancer family
Skin and eye
Collection
Other published and consortium studies
Source code
desm
PubMed links
1

Family and collection are EvidenceHelix groupings derived from the title; the source code is the source's own.

Related studies See all →

  • Acral Melanoma (TGEN, Genome Res 2017)Other published and consortium studies
  • Basal Cell Carcinoma (UNIGE, Nat Genet 2016)Other published and consortium studies
  • Cutaneous Squamous Cell Carcinoma (DFCI, Clin Cancer Res 2015)Other published and consortium studies
  • Cutaneous Squamous Cell Carcinoma (MD Anderson, Clin Cancer Res 2014)Other published and consortium studies

My notes & annotations (0)

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Original sources

  • Study on cBioPortal ↗
  • Source metadata file ↗
  • PubMed 26343386 ↗

Study metadata from cBioPortal DataHub (e1b75cd25b, synced 2026-10-31), available under the ODC Open Database License (ODbL) 1.0; attribution required. EvidenceLib is a research-education resource, not medical advice. Sources & licence