Cancer family · grouped by EvidenceHelix from study titles

Esophagus and stomach: 20 studies

Public cancer genomics studies in this group, with the collection each belongs to. Open a study for its description, citation and original source links.

• Esophageal Adenocarcinoma (DFCI, Nat Genet 2013)

  Whole-exome sequencing of 149 tumor/normal pairs and whole-genome sequencing of 16 pairs from 149 esophageal adenocarcinoma patients.

  Esophagus and stomachOther published and consortium studiesSource code escaPubMed 1

• Esophageal Adenocarcinoma (TCGA, PanCancer Atlas)

  Esophageal Adenocarcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratla…

  Esophagus and stomachTCGA PanCancer AtlasSource code escaPubMed 11

• Esophageal Cancer-TRAP Project (MSK, Lancet Oncol 2020)

  Targeted and WES recapture sequencing of tumor/normal samples from 37 Esophageal Cancer patients.

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Esophageal Carcinoma (TCGA, Firehose Legacy)

  TCGA Esophageal Carcinoma . Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/ESCA/20160128/). Previously known as TCGA Provisional.

  Esophagus and stomachTCGA Firehose LegacySource code esca

• Esophageal Carcinoma (TCGA, Nature 2017)

  Whole exome sequencing of 559 esophageal and gastric carcinoma tumors with matched normals.

  Esophagus and stomachTCGA (other releases)Source code egcPubMed 1

• Esophageal Squamous Cell Carcinoma (ICGC, Nature 2014)

  Whole-genome or whole-exome sequencing of 88 esophageal squamous cell carcinoma tumor/normal pairs.

  Esophagus and stomachOther published and consortium studiesSource code esccPubMed 1

• Esophageal Squamous Cell Carcinoma (UCLA, Nat Genet 2014)

  Whole exome sequencing (WXS) or targeted deep sequencing (TDS) of 139 paired esophageal squamous cell carcinoma patients.

  Esophagus and stomachOther published and consortium studiesSource code esccPubMed 1

• Esophageal/Stomach Cancer (MSK, 2020)

  Targeted sequencing of 487 Esophageal/stomach cancer tumor-normal pairs via MSK-IMPACT.

  Esophagus and stomachMSK studiesSource code stomachPubMed 1

• Esophagogastric Cancer (MSK, Clin Cancer Res 2022)

  Targeted sequencing of 237 esophagogastric tumor/normal pairs via MSK-IMPACT platform.

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Esophagogastric Cancer (MSK, Clin Cancer Res 2023)

  Whole exome sequencing of 64 esophagogastric cancers and their matched normal samples.

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Esophagogastric Cancer (MSK, J Natl Cancer Inst 2023)

  Targeted sequencing of 902 patients with early-onset and average-onset esophagogastric cancers and their matched normals via MSK-IMPACT.

  Esophagus and stomachMSK studiesSource code stomachPubMed 1

• Gastric Adenocarcinoma (TMUCIH, PNAS 2015)

  Whole-exome sequencing of 78 Gastric Adenocarcinomas and their matched normal samples.

  Esophagus and stomachOther published and consortium studiesSource code egcPubMed 1

• Gastric Cancer (OncoSG, 2018)

  Whole-genome sequencing of 147 gastric cancer tumors with matched normals. Courtesy of OncoSG (https://src.gisapps.org/OncoSG/).

  Esophagus and stomachOther published and consortium studiesSource code stadPubMed 1

• Metastatic Esophagogastric Cancer (MSK, Cancer Discovery 2017)

  Targeted sequencing of 341 samples from 305 metastatic esophagogastric cancer patients

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Stomach Adenocarcinoma (Pfizer and UHK, Nat Genet 2014)

  Whole genome sequencing of 100 gastric cancer tumor-normal pairs from the University of Hong Kong and Pfizer.

  Esophagus and stomachOther published and consortium studiesSource code stadPubMed 1

• Stomach Adenocarcinoma (TCGA, Firehose Legacy)

  TCGA Stomach Adenocarcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/STAD/20160128/). Previously known as TCGA Provisional.

  Esophagus and stomachTCGA Firehose LegacySource code stad

• Stomach Adenocarcinoma (TCGA, Nature 2014)

  Whole-exome sequencing of 295 primary gastric adenocarcinomas tumors with matched normals. TCGA Stomach Adenocarcinoma Project; raw data at the NCI (https://tcga-data.nci.nih.gov/docs/publications/stad_2014/).

  Esophagus and stomachTCGA (other releases)Source code stadPubMed 1

• Stomach Adenocarcinoma (TCGA, PanCancer Atlas)

  Stomach Adenocarcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas/p…

  Esophagus and stomachTCGA PanCancer AtlasSource code stadPubMed 11

• Stomach Adenocarcinoma (U Tokyo, Nat Genet 2014)

  Whole exome sequencing of 30 diffuse-type gastric adenocarcinoma samples (with matched normals) from the University of Tokyo.

  Esophagus and stomachOther published and consortium studiesSource code stadPubMed 1

• Stomach Adenocarcinoma (UHK, Nat Genet 2011)

  Exome sequencing of 22 gastric cancer samples with matched normals.

  Esophagus and stomachOther published and consortium studiesSource code stadPubMed 1