Ovarian Serous Cystadenocarcinoma (TCGA, PanCancer Atlas)

Summary

Ovarian Serous Cystadenocarcinoma (TCGA, PanCancer Atlas) is a study catalogued by cBioPortal DataHub under the cancer-type code hgsoc. EvidenceHelix groups it with gynecologic studies and lists it in the TCGA PanCancer Atlas collection.

Study description

Ovarian Serous Cystadenocarcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas/pancani3/index.html).

Text as published in the source's study metadata.

Citation & PubMed

TCGA, Cell 2018

Linked PubMed records: PMID 29625048, PMID 29596782, PMID 29622463, PMID 29617662, PMID 29625055, PMID 29625050, PMID 29617662, PMID 30643250, PMID 32214244, PMID 29625049, PMID 29850653, PMID 36334560

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier

ov_tcga_pan_can_atlas_2018

Short name

Ovarian (TCGA PanCan 2018)

Source cancer-type code

hgsoc

Reference genome

not given

Source access groups

PUBLIC;PANCAN

Original study

View on cBioPortal

Metadata file

meta_study.txt at e1b75cd25b

Database licence

ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data. TCGA data are available under the Broad Institute GDAC TCGA Analysis Pipeline License; TCGA-derived records are preliminary or legacy releases.

Citations

TCGA, Cell 2018

• PubMed record 29625048 ↗
• PubMed record 29596782 ↗
• PubMed record 29622463 ↗
• PubMed record 29617662 ↗
• PubMed record 29625055 ↗
• PubMed record 29625050 ↗
• PubMed record 29617662 ↗
• PubMed record 30643250 ↗
• PubMed record 32214244 ↗
• PubMed record 29625049 ↗
• PubMed record 29850653 ↗
• PubMed record 36334560 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

• High-Grade Serous Ovarian Cancer (MSK, NPJ Genome Med 2021)

  Targeted Sequencing of 45 Serous Ovarian Cancer tumor/normal pairs from 45 patients.

  GynecologicMSK studiesSource code hgsocPubMed 1

• Ovarian Cancer - MSK SPECTRUM (MSK, Nature 2022)

  Multi-region, multi-modal profiling of 42 untreated high-grade serous ovarian cancer (HGSOC) tumor/normal pairs. This study reports an integrative analysis of mutational processes and their impact on the tumor microen…

  GynecologicMSK studiesSource code hgsocPubMed 1

• Ovarian Serous Cystadenocarcinoma (TCGA, Firehose Legacy)

  TCGA Ovarian Serous Cystadenocarcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/OV/20160128/). Previously known as TCGA Provisional.

  GynecologicTCGA Firehose LegacySource code hgsoc

• Ovarian Serous Cystadenocarcinoma (TCGA, Nature 2011)

  Whole exome sequencing of 489 high-grade serous ovarian adenocarcinoma tumor/normal pairs. The Cancer Genome Atlas (TCGA) (http://cancergenome.nih.gov/) Serous Ovarian Cancer project. 489 cases. Raw data via the TCGA…

  GynecologicTCGA (other releases)Source code hgsocPubMed 1

• Cervical Squamous Cell Carcinoma (TCGA, PanCancer Atlas)

  Cervical Squamous Cell Carcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancan…

  GynecologicTCGA PanCancer AtlasSource code cescPubMed 12

• Uterine Carcinosarcoma (TCGA, PanCancer Atlas)

  Uterine Carcinosarcoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas/p…

  GynecologicTCGA PanCancer AtlasSource code ucsPubMed 11

• Uterine Corpus Endometrial Carcinoma (TCGA, PanCancer Atlas)

  Uterine Corpus Endometrial Carcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pa…

  GynecologicTCGA PanCancer AtlasSource code ucecPubMed 12

• Cancer Cell Line Encyclopedia (Novartis/Broad, Nature 2012)

  Targeted sequencing of 1020 samples from Cancer Cell Line Encyclopedia from the Broad Institute and Novartis.

  GynecologicOther published and consortium studiesSource code mixedPubMed 1

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