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Ovarian Cancer (Gray Foundation, Cancer Discov 2024)

cBioPortal DataHub · study ovary_geomx_gray_foundation_2024 · www.cbioportal.org/study/summary?id=ovary_geomx_gray_foundation_2024

Study metadataOpen database (ODbL)PubMed 1Other published and consortium studiesApproximately 1 min read

Table of Contents

1. Summary2. Study description3. Citation & PubMed4. Source & licence

Summary

Ovarian Cancer (Gray Foundation, Cancer Discov 2024) is a study catalogued by cBioPortal DataHub under the cancer-type code ovary. EvidenceHelix groups it with gynecologic studies.

This page is catalog metadata only: what the study is called and where to find it. It does not report findings, mutation frequencies or patient numbers, and it is not clinical guidance.

What this page is

Study description

Microregion transcriptomic data (GeoMx) and multiplex imaging (CyCIF) for High-Grade Serous ovarian Cancer Cases (HGSOC). This resource was supported by the Gray Foundation.

Text as published in the source's study metadata.

Citation & PubMed

Kader et al. Cancer Discov 2024

Linked PubMed records: PMID 39386723

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier
ovary_geomx_gray_foundation_2024
Short name
Ovary Geomx GF
Source cancer-type code
ovary
Reference genome
not given
Source access groups
not given
Original study
View on cBioPortal
Metadata file
meta_study.txt at e1b75cd25b
Database licence
ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data.

Citations

Kader et al. Cancer Discov 2024

  • PubMed record 39386723 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

  • Cancer Cell Line Encyclopedia (Novartis/Broad, Nature 2012)

    Targeted sequencing of 1020 samples from Cancer Cell Line Encyclopedia from the Broad Institute and Novartis.

    GynecologicOther published and consortium studiesSource code mixedPubMed 1
  • Endometrial Carcinoma (CPTAC, Cell 2020)

    Proteogenomic Characterization of Endometrial Carcinoma. Generated by CPTAC.

    GynecologicOther published and consortium studiesSource code ucecPubMed 1
  • Squamous Cell Carcinoma of the Vulva (CUK, Exp Mol Med 2018)

    Whole exome sequencing of tumor/normal pairs from 15 vulvar squamous cell carcinomas.

    GynecologicOther published and consortium studiesSource code vscPubMed 1
  • Uterine Carcinosarcoma (Johns Hopkins, Nat Commun 2014)

    Whole exome sequencing (WXS) of 22 uterine carcinosarcoma/uterine malignant mixed Mullerian (UCS) tumors with matched normals.

    GynecologicOther published and consortium studiesSource code ucsPubMed 1
  • Uterine Clear Cell Carcinoma (NIH, Cancer 2017)

    Whole exome sequencing of paired tumor-normal DNAs from 16 cases of clear cell endometrial tumors.

    GynecologicOther published and consortium studiesSource code ucccPubMed 1
  • Cervical Cancer (MSK, Clin Cancer Res 2023)

    Targeted sequencing of 177 cervical tumors and their matched normal samples via MSK-IMPACT.

    GynecologicMSK studiesSource code cervixPubMed 1
  • Cervical Squamous Cell Carcinoma (TCGA, PanCancer Atlas)

    Cervical Squamous Cell Carcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancan…

    GynecologicTCGA PanCancer AtlasSource code cescPubMed 12
  • Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA, Firehose Legacy)

    TCGA Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/CESC/20160128/). Previously known as TCGA Provisional.

    GynecologicTCGA Firehose LegacySource code cesc

Your notes

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At a glance

Study ID
ovary_geomx_gray_foundation_2024
Cancer family
Gynecologic
Collection
Other published and consortium studies
Source code
ovary
PubMed links
1

Family and collection are EvidenceHelix groupings derived from the title; the source code is the source's own.

Related studies See all →

  • Cancer Cell Line Encyclopedia (Novartis/Broad, Nature 2012)Other published and consortium studies
  • Endometrial Carcinoma (CPTAC, Cell 2020)Other published and consortium studies
  • Squamous Cell Carcinoma of the Vulva (CUK, Exp Mol Med 2018)Other published and consortium studies
  • Uterine Carcinosarcoma (Johns Hopkins, Nat Commun 2014)Other published and consortium studies

My notes & annotations (0)

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Original sources

  • Study on cBioPortal ↗
  • Source metadata file ↗
  • PubMed 39386723 ↗

Study metadata from cBioPortal DataHub (e1b75cd25b, synced 2026-10-31), available under the ODC Open Database License (ODbL) 1.0; attribution required. EvidenceLib is a research-education resource, not medical advice. Sources & licence