Pancreatic Adenocarcinoma (TCGA, PanCancer Atlas)

Summary

Pancreatic Adenocarcinoma (TCGA, PanCancer Atlas) is a study catalogued by cBioPortal DataHub under the cancer-type code paad. EvidenceHelix groups it with pancreas studies and lists it in the TCGA PanCancer Atlas collection.

Study description

Pancreatic Adenocarcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas/pancani3/index.html).

Text as published in the source's study metadata.

Citation & PubMed

TCGA, Cell 2018

Linked PubMed records: PMID 29625048, PMID 29596782, PMID 29622463, PMID 29617662, PMID 29625055, PMID 29625050, PMID 29617662, PMID 30643250, PMID 32214244, PMID 29625049, PMID 29850653, PMID 36334560

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier

paad_tcga_pan_can_atlas_2018

Short name

Pancreas (TCGA PanCan 2018)

Source cancer-type code

paad

Reference genome

not given

Source access groups

PUBLIC;PANCAN

Original study

View on cBioPortal

Metadata file

meta_study.txt at e1b75cd25b

Database licence

ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data. TCGA data are available under the Broad Institute GDAC TCGA Analysis Pipeline License; TCGA-derived records are preliminary or legacy releases.

Citations

TCGA, Cell 2018

• PubMed record 29625048 ↗
• PubMed record 29596782 ↗
• PubMed record 29622463 ↗
• PubMed record 29617662 ↗
• PubMed record 29625055 ↗
• PubMed record 29625050 ↗
• PubMed record 29617662 ↗
• PubMed record 30643250 ↗
• PubMed record 32214244 ↗
• PubMed record 29625049 ↗
• PubMed record 29850653 ↗
• PubMed record 36334560 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

• Metastatic Pancreatic Adenocarcinoma (PRINCE Trial, Nat Med. 2022) - iAtlas Harmonized

  Whole-exome sequencing and neoantigen landscape analysis of 93 metastatic pancreatic adenocarcinomas and their matched normals from a randomized phase 2 trial evaluating the efficacy of nivolumab and/or sotigalimab wi…

  PancreasOther published and consortium studiesSource code paadPubMed 1

• Pancreatic Adenocarcinoma (ICGC, Nature 2012)

  Whole-exome sequencing of 99 pancreatic samples and their matched normals.

  PancreasOther published and consortium studiesSource code paadPubMed 1

• Pancreatic Adenocarcinoma (QCMG, Nature 2016)

  Whole-genome and deep-exome sequencing analysis of 456 pancreatic ductal adenocarcinomas

  PancreasOther published and consortium studiesSource code paadPubMed 1

• Pancreatic Adenocarcinoma (TCGA, Firehose Legacy)

  TCGA Pancreatic Adenocarcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/PAAD/20160128/). Previously known as TCGA Provisional.

  PancreasTCGA Firehose LegacySource code paad

• Pancreatic Cancer (UTSW, Nat Commun 2015)

  Whole exome sequencing of 109 micro-dissected pancreatic cancer cases and normal control tissue.

  PancreasOther published and consortium studiesSource code paadPubMed 1

• Pancreatic Ductal Adenocarcinoma (CPTAC, Cell 2021)

  Whole-genome sequencing (WGS) and whole-exome sequencing (WES) of 140 pancreatic cancers with 67 normal adjacent tissues. Proteogenomic characterization generated by CPTAC.

  PancreasOther published and consortium studiesSource code paadPubMed 1

• Acinar Cell Carcinoma of the Pancreas (JHU, J Pathol 2014)

  Whole exome sequencing of 23 surgically resected pancreatic carcinomas with acinar differentiation and their matched normals.

  PancreasOther published and consortium studiesSource code paacPubMed 1

• Cystic Tumor of the Pancreas (Johns Hopkins, PNAS 2011)

  Whole-exome sequencing of major neoplastic cyst types of the pancreas: 8 serous cystadenomas (SCAs), 8 intraductal papillary mucinous neoplasms (IPMNs), 8 mucinous cystic neoplasms (MCNs), and 8 solid pseudopapillary…

  PancreasOther published and consortium studiesSource code pactPubMed 1

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