Esophageal/Stomach Cancer (MSK, 2020)

Summary

Esophageal/Stomach Cancer (MSK, 2020) is a study catalogued by cBioPortal DataHub under the cancer-type code stomach. EvidenceHelix groups it with esophagus and stomach studies.

Study description

Targeted sequencing of 487 Esophageal/stomach cancer tumor-normal pairs via MSK-IMPACT.

Text as published in the source's study metadata.

Citation & PubMed

Sihag et al. Clin Cancer Res 2021

Linked PubMed records: PMID 33795256

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier

egc_mskcc_2020

Short name

EGC (MSKCC, 2020)

Source cancer-type code

stomach

Reference genome

not given

Source access groups

not given

Original study

View on cBioPortal

Metadata file

meta_study.txt at e1b75cd25b

Database licence

ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data.

Citations

Sihag et al. Clin Cancer Res 2021

• PubMed record 33795256 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

• Esophagogastric Cancer (MSK, J Natl Cancer Inst 2023)

  Targeted sequencing of 902 patients with early-onset and average-onset esophagogastric cancers and their matched normals via MSK-IMPACT.

  Esophagus and stomachMSK studiesSource code stomachPubMed 1

• Esophageal Cancer-TRAP Project (MSK, Lancet Oncol 2020)

  Targeted and WES recapture sequencing of tumor/normal samples from 37 Esophageal Cancer patients.

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Esophagogastric Cancer (MSK, Clin Cancer Res 2022)

  Targeted sequencing of 237 esophagogastric tumor/normal pairs via MSK-IMPACT platform.

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Esophagogastric Cancer (MSK, Clin Cancer Res 2023)

  Whole exome sequencing of 64 esophagogastric cancers and their matched normal samples.

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Metastatic Esophagogastric Cancer (MSK, Cancer Discovery 2017)

  Targeted sequencing of 341 samples from 305 metastatic esophagogastric cancer patients

  Esophagus and stomachMSK studiesSource code egcPubMed 1

• Esophageal Adenocarcinoma (DFCI, Nat Genet 2013)

  Whole-exome sequencing of 149 tumor/normal pairs and whole-genome sequencing of 16 pairs from 149 esophageal adenocarcinoma patients.

  Esophagus and stomachOther published and consortium studiesSource code escaPubMed 1

• Esophageal Adenocarcinoma (TCGA, PanCancer Atlas)

  Esophageal Adenocarcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratla…

  Esophagus and stomachTCGA PanCancer AtlasSource code escaPubMed 11

• Esophageal Carcinoma (TCGA, Firehose Legacy)

  TCGA Esophageal Carcinoma . Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/ESCA/20160128/). Previously known as TCGA Provisional.

  Esophagus and stomachTCGA Firehose LegacySource code esca

Your notes

Notes and highlights stay in this browser only; they are not sent to EvidenceHelix.