Thyroid Carcinoma (TCGA, Firehose Legacy)

Summary

Thyroid Carcinoma (TCGA, Firehose Legacy) is a study catalogued by cBioPortal DataHub under the cancer-type code thpa. EvidenceHelix groups it with thyroid and endocrine studies and lists it in the TCGA Firehose Legacy collection.

Study description

TCGA Thyroid Carcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/THCA/20160128/). Previously known as TCGA Provisional.

Text as published in the source's study metadata.

Citation & PubMed

The source lists no citation or PubMed id for this study.

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier

thca_tcga

Short name

Thyroid (TCGA)

Source cancer-type code

thpa

Reference genome

not given

Source access groups

PUBLIC

Original study

View on cBioPortal

Metadata file

meta_study.txt at e1b75cd25b

Database licence

ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data. TCGA data are available under the Broad Institute GDAC TCGA Analysis Pipeline License; TCGA-derived records are preliminary or legacy releases.

Citations

The source lists no citation or PubMed id for this study.

Related studies

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• Thyroid Carcinoma (TCGA, PanCancer Atlas)

  Thyroid Carcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas/pancan…

  Thyroid and endocrineTCGA PanCancer AtlasSource code thpaPubMed 12

• Adrenocortical Carcinoma (TCGA, Firehose Legacy)

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  Thyroid and endocrineTCGA Firehose LegacySource code acc

• Adrenocortical Carcinoma (TCGA, PanCancer Atlas)

  Adrenocortical Carcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas…

  Thyroid and endocrineTCGA PanCancer AtlasSource code accPubMed 11

• Anaplastic Thyroid Cancers (GATCI, Cell Reports 2024)

  Whole-genome or whole-exome sequencing of 190 anaplastic thyroid carcinoma (ATC) and co-occurring differentiated thyroid carcinoma (DTC) samples.

  Thyroid and endocrineOther published and consortium studiesSource code thyroidPubMed 1

• Pituitary Adenoma (MSK, Acta Neuropathologica 2024)

  Targeted sequencing of 104 pituitary adenoma samples and their matched normals using MSK-IMPACT.

  Thyroid and endocrineMSK studiesSource code ptadPubMed 1

• Poorly-Differentiated and Anaplastic Thyroid Cancers (MSK, JCI 2016)

  Targeted sequencing of 341 cancer genes from 117 patient-derived PDTCs and ATCs

  Thyroid and endocrineMSK studiesSource code thyroidPubMed 1

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