Thyroid Carcinoma (TCGA, PanCancer Atlas)

Summary

Thyroid Carcinoma (TCGA, PanCancer Atlas) is a study catalogued by cBioPortal DataHub under the cancer-type code thpa. EvidenceHelix groups it with thyroid and endocrine studies and lists it in the TCGA PanCancer Atlas collection.

Study description

Thyroid Carcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas/pancani3/index.html).

Text as published in the source's study metadata.

Citation & PubMed

TCGA, Cell 2018

Linked PubMed records: PMID 29625048, PMID 29596782, PMID 29622463, PMID 29617662, PMID 29625055, PMID 29625050, PMID 29617662, PMID 30643250, PMID 32214244, PMID 29625049, PMID 29850653, PMID 36334560

Source & licence

Metadata from cBioPortal DataHub at e1b75cd25b, available under the ODC Open Database License (ODbL) 1.0. See the Source metadata tab for every field.

Source metadata

Study identifier

thca_tcga_pan_can_atlas_2018

Short name

Thyroid (TCGA PanCan 2018)

Source cancer-type code

thpa

Reference genome

not given

Source access groups

PUBLIC;PANCAN

Original study

View on cBioPortal

Metadata file

meta_study.txt at e1b75cd25b

Database licence

ODC Open Database License (ODbL) 1.0

Study-level metadata only (title, description, cancer-type code, citation, PubMed ids). No patient, sample, mutation or clinical data, and no publication full text, is included. Individual studies may carry their own terms; follow each study's source links before reusing its data. TCGA data are available under the Broad Institute GDAC TCGA Analysis Pipeline License; TCGA-derived records are preliminary or legacy releases.

Citations

TCGA, Cell 2018

• PubMed record 29625048 ↗
• PubMed record 29596782 ↗
• PubMed record 29622463 ↗
• PubMed record 29617662 ↗
• PubMed record 29625055 ↗
• PubMed record 29625050 ↗
• PubMed record 29617662 ↗
• PubMed record 30643250 ↗
• PubMed record 32214244 ↗
• PubMed record 29625049 ↗
• PubMed record 29850653 ↗
• PubMed record 36334560 ↗

Citation counts are not part of the source metadata and are not shown.

Related studies

• Papillary Thyroid Carcinoma (TCGA, Cell 2014)

  Exome and whole genome sequencing of 496 papillary thyroid carcinoma tumor/normal pairs

  Thyroid and endocrineTCGA (other releases)Source code thpaPubMed 1

• Thyroid Carcinoma (TCGA, Firehose Legacy)

  TCGA Thyroid Carcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/THCA/20160128/). Previously known as TCGA Provisional.

  Thyroid and endocrineTCGA Firehose LegacySource code thpa

• Adrenocortical Carcinoma (TCGA, PanCancer Atlas)

  Adrenocortical Carcinoma TCGA PanCancer data. The original data is here (https://gdc.cancer.gov/about-data/publications/pancanatlas). The publications are here (https://www.cell.com/pb-assets/consortium/pancanceratlas…

  Thyroid and endocrineTCGA PanCancer AtlasSource code accPubMed 11

• Adrenocortical Carcinoma (TCGA, Firehose Legacy)

  TCGA Adrenocortical Carcinoma. Source data from GDAC Firehose (http://gdac.broadinstitute.org/runs/stddata__2016_01_28/data/ACC/20160128/). Previously known as TCGA Provisional.

  Thyroid and endocrineTCGA Firehose LegacySource code acc

• Anaplastic Thyroid Cancers (GATCI, Cell Reports 2024)

  Whole-genome or whole-exome sequencing of 190 anaplastic thyroid carcinoma (ATC) and co-occurring differentiated thyroid carcinoma (DTC) samples.

  Thyroid and endocrineOther published and consortium studiesSource code thyroidPubMed 1

• Pituitary Adenoma (MSK, Acta Neuropathologica 2024)

  Targeted sequencing of 104 pituitary adenoma samples and their matched normals using MSK-IMPACT.

  Thyroid and endocrineMSK studiesSource code ptadPubMed 1

• Poorly-Differentiated and Anaplastic Thyroid Cancers (MSK, JCI 2016)

  Targeted sequencing of 341 cancer genes from 117 patient-derived PDTCs and ATCs

  Thyroid and endocrineMSK studiesSource code thyroidPubMed 1

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